Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Gm11591-201ENSMUST00000120063 702 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Gm14704-201ENSMUST00000120300 874 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC11.9□□□□□ -0.5
Hcn1O88704 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.9□□□□□ -0.5
Hcn1O88704 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Hcn1O88704 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm38002-201ENSMUST00000193255 180 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Gm18054-201ENSMUST00000207539 555 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm45880-201ENSMUST00000213041 853 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Gm32025-201ENSMUST00000217960 307 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Hcn1O88704 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.9□□□□□ -0.5
Hcn1O88704 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.9□□□□□ -0.5
Hcn1O88704 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.9□□□□□ -0.5
Hcn1O88704 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Hcn1O88704 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hcn1O88704 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Hcn1O88704 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.51
Hcn1O88704 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.89□□□□□ -0.51
Hcn1O88704 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Hcn1O88704 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Snord83b-201ENSMUST00000104546 94 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Hcn1O88704 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm19309-201ENSMUST00000218295 205 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.89□□□□□ -0.51
Hcn1O88704 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hcn1O88704 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hcn1O88704 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Hcn1O88704 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.89□□□□□ -0.51
Hcn1O88704 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Hcn1O88704 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms