Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Gm10807-201ENSMUST00000177134 795 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Gm6430-201ENSMUST00000054664 1248 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Gm5451-201ENSMUST00000080545 579 ntBASIC15.78■□□□□ 0.12
Ubr1O70481 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ubr1O70481 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC15.78■□□□□ 0.12
Ubr1O70481 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ubr1O70481 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC15.78■□□□□ 0.12
Ubr1O70481 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ubr1O70481 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Gm44152-201ENSMUST00000205007 1691 ntBASIC15.77■□□□□ 0.12
Ubr1O70481 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC15.77■□□□□ 0.12
Ubr1O70481 Gm11675-201ENSMUST00000121873 832 ntBASIC15.77■□□□□ 0.12
Ubr1O70481 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.77■□□□□ 0.12
Ubr1O70481 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC15.77■□□□□ 0.12
Ubr1O70481 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Ubr1O70481 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Gm18983-201ENSMUST00000222884 2729 ntBASIC15.77■□□□□ 0.12
Ubr1O70481 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ubr1O70481 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Gm9796-201ENSMUST00000062249 2250 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Ubr1O70481 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Gm6450-201ENSMUST00000200896 574 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 Gm8342-201ENSMUST00000209839 757 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC15.77■□□□□ 0.11
Ubr1O70481 Gm7940-201ENSMUST00000218195 769 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ubr1O70481 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.77■□□□□ 0.11
Ubr1O70481 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC15.77■□□□□ 0.11
Ubr1O70481 Gm13347-201ENSMUST00000120298 1353 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ubr1O70481 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC15.77■□□□□ 0.11
Ubr1O70481 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC15.76■□□□□ 0.11
Ubr1O70481 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.76■□□□□ 0.11
Ubr1O70481 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 Zfp125-201ENSMUST00000079237 2488 ntBASIC15.76■□□□□ 0.11
Ubr1O70481 Gm23272-201ENSMUST00000104053 129 ntBASIC15.76■□□□□ 0.11
Ubr1O70481 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ubr1O70481 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC15.76■□□□□ 0.11
Ubr1O70481 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms