Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Gm28043E0CXC2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gm2231-201ENSMUST00000125661 612 ntBASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gm29127-201ENSMUST00000188304 517 ntBASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Gm28043E0CXC2 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Gm28043E0CXC2 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm4984-201ENSMUST00000115987 360 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm12390-201ENSMUST00000117897 397 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm13369-201ENSMUST00000119442 987 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.45□□□□□ -0.42
Gm28043E0CXC2 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.44□□□□□ -0.42
Gm28043E0CXC2 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms