Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.29□□□□□ -0.76
Trbv29A0A0G2LB96 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gm43823-201ENSMUST00000197391 1808 ntBASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gm12363-201ENSMUST00000122250 668 ntBASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gm9022-201ENSMUST00000182482 992 ntBASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trbv29A0A0G2LB96 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trbv29A0A0G2LB96 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm13492-201ENSMUST00000119772 665 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm11964-201ENSMUST00000120982 444 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm12091-201ENSMUST00000146791 830 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm24196-201ENSMUST00000179161 110 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm27243-201ENSMUST00000183964 521 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trbv29A0A0G2LB96 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms