Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Gm23147-201ENSMUST00000178841 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm26095-201ENSMUST00000179270 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22171-201ENSMUST00000179283 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm23936-201ENSMUST00000179354 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm22619-201ENSMUST00000179516 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25255-201ENSMUST00000179579 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24755-201ENSMUST00000179691 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm26506-201ENSMUST00000179692 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm25086-201ENSMUST00000179931 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm23243-201ENSMUST00000180047 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24659-201ENSMUST00000180212 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm24169-201ENSMUST00000180244 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm23689-201ENSMUST00000180354 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm27359-201ENSMUST00000184153 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm27785-201ENSMUST00000184268 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm27466-201ENSMUST00000184396 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm27703-201ENSMUST00000184836 110 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm8000-201ENSMUST00000188378 592 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm44335-201ENSMUST00000196879 141 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm44297-201ENSMUST00000198304 141 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm44346-201ENSMUST00000198851 141 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm43937-201ENSMUST00000204640 3122 ntBASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trav8-1A0A075B641 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12537-201ENSMUST00000119266 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12070-201ENSMUST00000119551 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12428-201ENSMUST00000119844 727 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12671-201ENSMUST00000119978 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm13292-201ENSMUST00000120014 1000 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12403-201ENSMUST00000121384 959 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm10359-201ENSMUST00000180167 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm12033-201ENSMUST00000180654 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm5559-201ENSMUST00000180755 1002 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm4335-201ENSMUST00000182581 1004 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm10253-201ENSMUST00000194270 940 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm43474-201ENSMUST00000196415 774 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm17330-201ENSMUST00000221047 165 ntBASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Trav8-1A0A075B641 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms