Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Gm6606-201ENSMUST00000193613 947 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Gm6450-201ENSMUST00000200896 574 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Gm17825-201ENSMUST00000206836 794 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Gm7904-201ENSMUST00000217049 465 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Col4a4Q9QZR9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm11957-201ENSMUST00000118304 779 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm24954-201ENSMUST00000178831 110 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm26272-201ENSMUST00000179241 132 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm37197-201ENSMUST00000195607 401 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm44216-201ENSMUST00000203942 157 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 D730050B12Rik-201ENSMUST00000223149 585 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Smok4a-201ENSMUST00000074512 1455 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Col4a4Q9QZR9 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm12036-201ENSMUST00000120008 530 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm14034-201ENSMUST00000120147 551 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm14395-201ENSMUST00000120494 563 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm7985-201ENSMUST00000183329 981 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm6423-201ENSMUST00000204315 934 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm18035-201ENSMUST00000211962 589 ntBASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Col4a4Q9QZR9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms