Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm18159-201ENSMUST00000174516 1070 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Ccdc163-204ENSMUST00000106464 1213 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm43830-201ENSMUST00000198760 1067 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gadd45a-206ENSMUST00000204282 460 ntTSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Gm6189-201ENSMUST00000164487 2082 ntBASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Cacna1fQ9JIS7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm34023-201ENSMUST00000195539 217 ntBASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm40652-201ENSMUST00000218944 895 ntTSL 5 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm24891-201ENSMUST00000104391 136 ntBASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Cacna1fQ9JIS7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Cacna1fQ9JIS7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms