Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm11989-201ENSMUST00000117240 672 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm11362-201ENSMUST00000118838 850 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm28071-201ENSMUST00000190355 478 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Gm26035-201ENSMUST00000083065 308 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Stag1Q9D3E6 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm14760-201ENSMUST00000121831 999 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm18734-201ENSMUST00000172937 808 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm7848-201ENSMUST00000210739 718 ntBASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.79□□□□□ -0.04
Stag1Q9D3E6 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Gm14263-201ENSMUST00000117955 746 ntBASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Gm8959-201ENSMUST00000213150 571 ntBASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Stag1Q9D3E6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Stag1Q9D3E6 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms