Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Snord83b-201ENSMUST00000104546 94 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm38671-201ENSMUST00000200573 130 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trim8Q99PJ2 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm13612-201ENSMUST00000119276 390 ntBASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Trim8Q99PJ2 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.17□□□□□ -0.46
Trim8Q99PJ2 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms