Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm23255-201ENSMUST00000102244 110 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm13019-201ENSMUST00000120000 276 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm24845-201ENSMUST00000158034 109 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm3329-201ENSMUST00000159873 556 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm8451-201ENSMUST00000170338 447 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm43854-201ENSMUST00000200418 394 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm7536-201ENSMUST00000077389 444 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm5453-201ENSMUST00000080866 447 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.89□□□□□ -0.35
Col25a1Q99MQ5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Poc1a-209ENSMUST00000216228 1431 ntTSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 AC158355.1-201ENSMUST00000215895 1705 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm13492-201ENSMUST00000119772 665 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm6397-201ENSMUST00000161973 1069 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm18159-201ENSMUST00000174516 1070 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm18038-201ENSMUST00000197900 485 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm43520-201ENSMUST00000197996 164 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Col25a1Q99MQ5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms