Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gm9996-201ENSMUST00000070359 913 ntBASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nkx6-1Q99MA9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm11340-201ENSMUST00000119226 412 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm15881-201ENSMUST00000148792 942 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm18893-201ENSMUST00000198416 943 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm43962-201ENSMUST00000203898 190 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm6905-201ENSMUST00000205729 511 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm270-201ENSMUST00000223010 976 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm9129-201ENSMUST00000218173 1689 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Nkx6-1Q99MA9 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm7666-201ENSMUST00000146631 819 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 H2-Q3-201ENSMUST00000172583 608 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm4482-201ENSMUST00000200876 742 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Nkx6-1Q99MA9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms