Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Vmp1Q99KU0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Vmp1Q99KU0 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 AC122881.1-201ENSMUST00000225757 2695 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm37042-201ENSMUST00000193816 581 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm4768-201ENSMUST00000206199 686 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm19163-201ENSMUST00000223313 780 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Gm9899-201ENSMUST00000065519 555 ntBASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Vmp1Q99KU0 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Gm43438-201ENSMUST00000198133 379 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.01□□□□□ -0.49
Vmp1Q99KU0 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Vmp1Q99KU0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms