Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm6905-201ENSMUST00000205729 511 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm4157-201ENSMUST00000211647 679 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smarcd2Q99JR8 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smarcd2Q99JR8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gm15782-201ENSMUST00000121073 445 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gm8343-201ENSMUST00000182705 994 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gm43916-201ENSMUST00000205062 967 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Ginm1-202ENSMUST00000065124 300 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gm44999-201ENSMUST00000207456 1493 ntBASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smarcd2Q99JR8 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smarcd2Q99JR8 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms