Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 TNRC18P3-201ENST00000441896 2691 ntBASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC006001.1-201ENST00000325130 474 ntBASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC079316.1-201ENST00000548397 411 ntBASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 MIR6787-201ENST00000616675 61 ntBASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCDC85AQ96PX6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 MPV17-205ENST00000402310 906 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 AC091271.1-201ENST00000611877 1162 ntBASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 PAUPAR-201ENST00000630360 2965 ntBASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 KRT8P44-201ENST00000441609 1350 ntBASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 AC007787.1-201ENST00000588095 1583 ntBASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCDC85AQ96PX6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 AC243960.2-201ENST00000600996 747 ntBASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.13■□□□□ 0.65
CCDC85AQ96PX6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms