Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm27438-201ENSMUST00000183480 110 ntBASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.37□□□□□ -0.11
Smc1bQ920F6 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Smc1bQ920F6 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm13611-201ENSMUST00000118269 318 ntBASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm13996-201ENSMUST00000118456 430 ntBASIC14.36□□□□□ -0.11
Smc1bQ920F6 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm37737-201ENSMUST00000195013 1638 ntBASIC14.36□□□□□ -0.11
Smc1bQ920F6 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gm43908-201ENSMUST00000205074 1472 ntBASIC14.36□□□□□ -0.11
Smc1bQ920F6 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.36□□□□□ -0.11
Smc1bQ920F6 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Snord83b-201ENSMUST00000104546 94 ntBASIC14.35□□□□□ -0.11
Smc1bQ920F6 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smc1bQ920F6 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smc1bQ920F6 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms