Protein–RNA interactions for Protein: Q91Y09

Pcdhac2, Protocadherin alpha C2, mousemouse

Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac2Q91Y09 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhac2Q91Y09 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 AC126262.1-201ENSMUST00000221802 1904 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Mir7677-201ENSMUST00000184226 67 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Ginm1-202ENSMUST00000065124 300 ntBASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhac2Q91Y09 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm11941-201ENSMUST00000119904 610 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm12029-201ENSMUST00000120073 832 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Rprl1-201ENSMUST00000158050 327 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm26448-201ENSMUST00000082446 203 ntBASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhac2Q91Y09 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms