Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim60Q8VI40 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.84□□□□□ -0.35
Trim60Q8VI40 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.84□□□□□ -0.35
Trim60Q8VI40 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trim60Q8VI40 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.83□□□□□ -0.35
Trim60Q8VI40 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trim60Q8VI40 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Gm11964-201ENSMUST00000120982 444 ntBASIC12.83□□□□□ -0.36
Trim60Q8VI40 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Gm6007-201ENSMUST00000208170 823 ntBASIC12.83□□□□□ -0.36
Trim60Q8VI40 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trim60Q8VI40 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trim60Q8VI40 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm26927-201ENSMUST00000182385 965 ntBASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm27847-201ENSMUST00000183711 107 ntBASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm27375-201ENSMUST00000183799 107 ntBASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.82□□□□□ -0.36
Trim60Q8VI40 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms