Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm11663-201ENSMUST00000117888 290 ntBASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm8731-201ENSMUST00000118088 412 ntBASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vopp1Q8R1C3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm22144-201ENSMUST00000157402 102 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm18367-201ENSMUST00000176139 600 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm9192-201ENSMUST00000183221 985 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm45909-201ENSMUST00000212413 1031 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vopp1Q8R1C3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vopp1Q8R1C3 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms