Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim52Q8CDV4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm15432-201ENSMUST00000121106 195 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm4034-201ENSMUST00000187674 480 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm18893-201ENSMUST00000198416 943 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm9797-202ENSMUST00000218003 294 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Ginm1-202ENSMUST00000065124 300 ntBASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim52Q8CDV4 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Gm10152-201ENSMUST00000193475 1344 ntBASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Gm24891-201ENSMUST00000104391 136 ntBASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim52Q8CDV4 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Mir6546-201ENSMUST00000184460 62 ntBASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.22■□□□□ 0.03
Trim52Q8CDV4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Gm5051-201ENSMUST00000204085 485 ntBASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trim52Q8CDV4 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms