Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm44831-201ENSMUST00000208469 2989 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Vcpip1Q8CDG3 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gm27682-201ENSMUST00000183930 110 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gm5370-201ENSMUST00000187187 574 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gm8227-201ENSMUST00000223306 571 ntBASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vcpip1Q8CDG3 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gm10268-201ENSMUST00000085340 555 ntBASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vcpip1Q8CDG3 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Vcpip1Q8CDG3 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vcpip1Q8CDG3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.33□□□□□ -0.28
Vcpip1Q8CDG3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms