Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Gm15236-201ENSMUST00000117309 379 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 AC159246.1-201ENSMUST00000214478 249 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Gzmn-202ENSMUST00000225535 989 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Gm18626-201ENSMUST00000221512 1409 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trim47Q8C0E3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC13.79□□□□□ -0.2
Trim47Q8C0E3 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm12015-201ENSMUST00000117065 843 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm25700-201ENSMUST00000177693 110 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 CT010486.3-201ENSMUST00000224555 811 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim47Q8C0E3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim47Q8C0E3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm12286-201ENSMUST00000119246 1002 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm6963-201ENSMUST00000147879 379 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm44958-201ENSMUST00000203734 736 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim47Q8C0E3 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms