Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm9630-201ENSMUST00000178304 885 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm18038-201ENSMUST00000197900 485 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Gm17827-201ENSMUST00000211825 742 ntBASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scfd1Q8BRF7 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm18782-201ENSMUST00000209023 1399 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm23912-201ENSMUST00000104687 87 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm43378-201ENSMUST00000199336 582 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm3786-201ENSMUST00000202659 378 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm44136-201ENSMUST00000203819 1106 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm7848-201ENSMUST00000210739 718 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Scfd1Q8BRF7 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.15□□□□□ -0.15
Scfd1Q8BRF7 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Scfd1Q8BRF7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.14□□□□□ -0.15
Scfd1Q8BRF7 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms