Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp2bQ8BJF9 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp2bQ8BJF9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm15703-201ENSMUST00000120250 880 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm12363-201ENSMUST00000122250 668 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm25927-201ENSMUST00000175058 117 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm32025-201ENSMUST00000217960 307 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Gm5356-201ENSMUST00000093326 615 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Map1b-203ENSMUST00000223725 2669 ntBASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp2bQ8BJF9 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chmp2bQ8BJF9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms