Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Gm8099-201ENSMUST00000200510 742 ntBASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rnf38Q8BI21 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.01□□□□□ -0.49
Rnf38Q8BI21 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rnf38Q8BI21 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12□□□□□ -0.49
Rnf38Q8BI21 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm7029-201ENSMUST00000173226 450 ntBASIC12□□□□□ -0.49
Rnf38Q8BI21 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Rnf38Q8BI21 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm27331-201ENSMUST00000183705 60 ntBASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm44799-201ENSMUST00000207639 1202 ntBASIC12□□□□□ -0.49
Rnf38Q8BI21 Gm2824-203ENSMUST00000226189 1228 ntBASIC12□□□□□ -0.49
Rnf38Q8BI21 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 n-R5s77-201ENSMUST00000083757 119 ntBASIC12□□□□□ -0.49
Rnf38Q8BI21 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12□□□□□ -0.49
Rnf38Q8BI21 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rnf38Q8BI21 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms