Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Pcdh19Q80TF3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm13296-201ENSMUST00000117854 997 ntBASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm24845-201ENSMUST00000158034 109 ntBASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Pcdh19Q80TF3 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Gzmn-202ENSMUST00000225535 989 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Mettl6-204ENSMUST00000227595 1027 ntBASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Pcdh19Q80TF3 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms