Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm13996-201ENSMUST00000118456 430 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm8018-201ENSMUST00000173536 789 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gzmn-202ENSMUST00000225535 989 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.57□□□□□ -0.56
Pif1Q80SX8 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Pif1Q80SX8 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm13296-201ENSMUST00000117854 997 ntBASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm14263-201ENSMUST00000117955 746 ntBASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm43378-201ENSMUST00000199336 582 ntBASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.56□□□□□ -0.56
Pif1Q80SX8 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Pif1Q80SX8 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms