Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm23931-201ENSMUST00000103842 109 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm5781-201ENSMUST00000219792 443 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.6□□□□□ -0.39
Sp140Q6NSQ5 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Map1b-203ENSMUST00000223725 2669 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm22018-201ENSMUST00000104357 131 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm15824-201ENSMUST00000119516 955 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm16379-201ENSMUST00000161469 348 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm27390-201ENSMUST00000184516 176 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm18304-201ENSMUST00000189162 546 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm8762-201ENSMUST00000193486 339 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm39404-201ENSMUST00000216350 313 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gm45925-201ENSMUST00000218882 744 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.59□□□□□ -0.39
Sp140Q6NSQ5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Sp140Q6NSQ5 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.58□□□□□ -0.39
Sp140Q6NSQ5 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Sp140Q6NSQ5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Sp140Q6NSQ5 Gm23119-201ENSMUST00000158610 140 ntBASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms