Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Sdc3Q64519 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm25214-201ENSMUST00000104573 129 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm11964-201ENSMUST00000120982 444 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm13813-201ENSMUST00000120998 787 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sdc3Q64519 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm26956-201ENSMUST00000182176 986 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.98□□□□□ -0.49
Sdc3Q64519 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm44405-201ENSMUST00000198952 126 ntBASIC11.98□□□□□ -0.49
Sdc3Q64519 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Sdc3Q64519 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Sdc3Q64519 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Sdc3Q64519 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm20482-202ENSMUST00000174729 825 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC11.97□□□□□ -0.49
Sdc3Q64519 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm45925-201ENSMUST00000218882 744 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Sdc3Q64519 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.97□□□□□ -0.49
Sdc3Q64519 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sdc3Q64519 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Sdc3Q64519 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.96□□□□□ -0.49
Sdc3Q64519 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sdc3Q64519 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms