Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm12859-201ENSMUST00000117834 427 ntBASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm2231-201ENSMUST00000125661 612 ntBASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm37042-201ENSMUST00000193816 581 ntBASIC11.85□□□□□ -0.51
Nr1h4Q60641 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.85□□□□□ -0.51
Nr1h4Q60641 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nr1h4Q60641 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.85□□□□□ -0.51
Nr1h4Q60641 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.84□□□□□ -0.51
Nr1h4Q60641 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm10156-201ENSMUST00000122364 462 ntBASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm45668-201ENSMUST00000211271 493 ntBASIC11.84□□□□□ -0.51
Nr1h4Q60641 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nr1h4Q60641 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nr1h4Q60641 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Nr1h4Q60641 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm7488-201ENSMUST00000117148 684 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm26185-201ENSMUST00000157692 266 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm17208-201ENSMUST00000168388 535 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm27701-201ENSMUST00000184498 110 ntBASIC11.83□□□□□ -0.52
Nr1h4Q60641 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.83□□□□□ -0.52
Nr1h4Q60641 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms