Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Tmem40Q4FJU9 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm25109-201ENSMUST00000122474 114 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm13844-201ENSMUST00000134541 581 ntTSL 3 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm44967-201ENSMUST00000207047 631 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Acot6-202ENSMUST00000222921 3622 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 AC123857.2-201ENSMUST00000225756 1582 ntBASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tmem40Q4FJU9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm44441-201ENSMUST00000203642 2475 ntBASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm9506-201ENSMUST00000118516 320 ntBASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm20177-201ENSMUST00000203705 334 ntBASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm19208-201ENSMUST00000213861 912 ntBASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
Tmem40Q4FJU9 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms