Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox9Q04887 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
Sox9Q04887 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm44329-201ENSMUST00000197469 112 ntBASIC12.84□□□□□ -0.35
Sox9Q04887 Gm44980-201ENSMUST00000205826 314 ntBASIC12.84□□□□□ -0.35
Sox9Q04887 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.84□□□□□ -0.35
Sox9Q04887 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.84□□□□□ -0.35
Sox9Q04887 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm8894-201ENSMUST00000074642 666 ntBASIC12.84□□□□□ -0.35
Sox9Q04887 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Sox9Q04887 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.84□□□□□ -0.35
Sox9Q04887 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Sox9Q04887 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.35
Sox9Q04887 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Sox9Q04887 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sox9Q04887 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Sox9Q04887 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Sox9Q04887 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox9Q04887 Gm12857-201ENSMUST00000117678 592 ntBASIC12.83□□□□□ -0.36
Sox9Q04887 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox9Q04887 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.83□□□□□ -0.36
Sox9Q04887 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 1700088E04Rik-210ENSMUST00000190509 871 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Gm9645-201ENSMUST00000197131 792 ntBASIC12.83□□□□□ -0.36
Sox9Q04887 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC12.83□□□□□ -0.36
Sox9Q04887 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Gm5455-201ENSMUST00000058710 715 ntBASIC12.83□□□□□ -0.36
Sox9Q04887 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox9Q04887 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox9Q04887 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Sox9Q04887 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Sox9Q04887 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.83□□□□□ -0.36
Sox9Q04887 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox9Q04887 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Sox9Q04887 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sox9Q04887 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm7541-201ENSMUST00000118361 535 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm13937-201ENSMUST00000121000 988 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm4862-201ENSMUST00000170405 438 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Gm27530-201ENSMUST00000184096 98 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm9785-201ENSMUST00000062642 1006 ntBASIC12.82□□□□□ -0.36
Sox9Q04887 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Sox9Q04887 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox9Q04887 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.82□□□□□ -0.36
Sox9Q04887 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Sox9Q04887 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms