Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC14.07□□□□□ -0.16
GabpaQ00422 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
GabpaQ00422 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
GabpaQ00422 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC14.07□□□□□ -0.16
GabpaQ00422 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC14.07□□□□□ -0.16
GabpaQ00422 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
GabpaQ00422 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 Gm6335-201ENSMUST00000118081 1194 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 Gm7816-201ENSMUST00000119884 1194 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 Gm15542-201ENSMUST00000121585 1194 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC14.06□□□□□ -0.16
GabpaQ00422 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC14.06□□□□□ -0.16
GabpaQ00422 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.06□□□□□ -0.16
GabpaQ00422 Gm28071-201ENSMUST00000190355 478 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 Gm42997-202ENSMUST00000200321 985 ntBASIC14.06□□□□□ -0.16
GabpaQ00422 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
GabpaQ00422 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
GabpaQ00422 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.06□□□□□ -0.16
GabpaQ00422 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.06□□□□□ -0.16
GabpaQ00422 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GabpaQ00422 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Gm22133-201ENSMUST00000102082 109 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Gm15515-201ENSMUST00000117827 822 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.05□□□□□ -0.16
GabpaQ00422 Olfr1347-205ENSMUST00000220413 964 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GabpaQ00422 Gm5455-201ENSMUST00000058710 715 ntBASIC14.05□□□□□ -0.16
GabpaQ00422 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GabpaQ00422 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GabpaQ00422 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
GabpaQ00422 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GabpaQ00422 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.04□□□□□ -0.16
GabpaQ00422 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC14.04□□□□□ -0.16
GabpaQ00422 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm44100-201ENSMUST00000204329 436 ntBASIC14.04□□□□□ -0.16
GabpaQ00422 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GabpaQ00422 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC14.04□□□□□ -0.16
GabpaQ00422 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC14.04□□□□□ -0.16
GabpaQ00422 Gm270-201ENSMUST00000223010 976 ntBASIC14.04□□□□□ -0.16
GabpaQ00422 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.04□□□□□ -0.16
GabpaQ00422 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms