Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Gm10076-201ENSMUST00000073238 384 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Gm9361-201ENSMUST00000198695 1507 ntBASIC12.76□□□□□ -0.37
Msx3P70354 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Msx3P70354 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Msx3P70354 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.75□□□□□ -0.37
Msx3P70354 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Gm27023-201ENSMUST00000182372 285 ntBASIC12.75□□□□□ -0.37
Msx3P70354 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Msx3P70354 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.75□□□□□ -0.37
Msx3P70354 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Msx3P70354 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Msx3P70354 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Msx3P70354 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.75□□□□□ -0.37
Msx3P70354 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Msx3P70354 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.74□□□□□ -0.37
Msx3P70354 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.74□□□□□ -0.37
Msx3P70354 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Msx3P70354 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.74□□□□□ -0.37
Msx3P70354 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.74□□□□□ -0.37
Msx3P70354 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.74□□□□□ -0.37
Msx3P70354 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.74□□□□□ -0.37
Msx3P70354 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Msx3P70354 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Msx3P70354 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.74□□□□□ -0.37
Msx3P70354 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Msx3P70354 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Matn2-203ENSMUST00000226766 3252 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Msx3P70354 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 Cog3-203ENSMUST00000227473 4197 ntBASIC12.73□□□□□ -0.37
Msx3P70354 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.73□□□□□ -0.37
Msx3P70354 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms