Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cux2P70298 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cux2P70298 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Gm6831-202ENSMUST00000213025 1673 ntBASIC19.92■□□□□ 0.78
Cux2P70298 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Gm11405-201ENSMUST00000118689 1556 ntBASIC19.92■□□□□ 0.78
Cux2P70298 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC19.92■□□□□ 0.78
Cux2P70298 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC19.92■□□□□ 0.78
Cux2P70298 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC19.92■□□□□ 0.78
Cux2P70298 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC19.92■□□□□ 0.78
Cux2P70298 Gm43854-201ENSMUST00000200418 394 ntBASIC19.92■□□□□ 0.78
Cux2P70298 Gm7940-201ENSMUST00000218195 769 ntBASIC19.92■□□□□ 0.78
Cux2P70298 BC106175-202ENSMUST00000219344 1213 ntBASIC19.92■□□□□ 0.78
Cux2P70298 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cux2P70298 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Cux2P70298 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC19.91■□□□□ 0.78
Cux2P70298 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Gm9673-201ENSMUST00000119287 781 ntBASIC19.91■□□□□ 0.78
Cux2P70298 Gm12274-201ENSMUST00000120062 385 ntBASIC19.91■□□□□ 0.78
Cux2P70298 Gm9166-201ENSMUST00000120293 561 ntBASIC19.91■□□□□ 0.78
Cux2P70298 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC19.91■□□□□ 0.78
Cux2P70298 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Cux2P70298 Gm9081-201ENSMUST00000182346 991 ntBASIC19.91■□□□□ 0.78
Cux2P70298 AC138716.2-201ENSMUST00000226670 1016 ntBASIC19.91■□□□□ 0.78
Cux2P70298 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cux2P70298 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cux2P70298 Gm9924-202ENSMUST00000192760 2311 ntBASIC19.91■□□□□ 0.78
Cux2P70298 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
Cux2P70298 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cux2P70298 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC19.9■□□□□ 0.78
Cux2P70298 Gm12663-201ENSMUST00000118481 958 ntBASIC19.9■□□□□ 0.78
Cux2P70298 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC19.9■□□□□ 0.78
Cux2P70298 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC19.9■□□□□ 0.78
Cux2P70298 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC19.9■□□□□ 0.78
Cux2P70298 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
Cux2P70298 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Gm37513-201ENSMUST00000194830 2268 ntBASIC19.9■□□□□ 0.78
Cux2P70298 Gm38378-201ENSMUST00000195153 2268 ntBASIC19.9■□□□□ 0.78
Cux2P70298 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cux2P70298 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cux2P70298 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cux2P70298 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.78
Cux2P70298 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC19.89■□□□□ 0.77
Cux2P70298 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Gm12036-201ENSMUST00000120008 530 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm12906-201ENSMUST00000154610 441 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm26368-201ENSMUST00000157826 118 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm24809-201ENSMUST00000175318 271 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cux2P70298 Ighv1-2-201ENSMUST00000195325 378 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm42511-201ENSMUST00000196160 234 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm44882-201ENSMUST00000205702 802 ntBASIC19.89■□□□□ 0.77
Cux2P70298 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cux2P70298 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cux2P70298 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms