Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Pdlim4P70271 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Pdlim4P70271 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.37□□□□□ -0.75
Pdlim4P70271 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Mir1247-201ENSMUST00000116706 82 ntBASIC10.37□□□□□ -0.75
Pdlim4P70271 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm38092-201ENSMUST00000195600 653 ntBASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm42693-201ENSMUST00000196779 631 ntBASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.37□□□□□ -0.75
Pdlim4P70271 AC125350.2-201ENSMUST00000224737 727 ntBASIC10.37□□□□□ -0.75
Pdlim4P70271 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Pdlim4P70271 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.37□□□□□ -0.75
Pdlim4P70271 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Pdlim4P70271 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm28323-201ENSMUST00000186817 2499 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm8617-201ENSMUST00000118796 2222 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm24548-201ENSMUST00000158650 108 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm19309-201ENSMUST00000218295 205 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gm9899-201ENSMUST00000065519 555 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.36□□□□□ -0.75
Pdlim4P70271 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Pdlim4P70271 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Pdlim4P70271 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms