Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Nphp4P59240 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm11660-201ENSMUST00000120955 412 ntBASIC16.66■□□□□ 0.26
Nphp4P59240 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm8815-201ENSMUST00000173809 620 ntBASIC16.66■□□□□ 0.26
Nphp4P59240 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm45575-201ENSMUST00000210283 548 ntBASIC16.66■□□□□ 0.26
Nphp4P59240 Gm6867-201ENSMUST00000219165 425 ntBASIC16.66■□□□□ 0.26
Nphp4P59240 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm38355-201ENSMUST00000192514 1570 ntBASIC16.66■□□□□ 0.26
Nphp4P59240 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC16.66■□□□□ 0.26
Nphp4P59240 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Nphp4P59240 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Gm27196-201ENSMUST00000184787 2582 ntBASIC16.65■□□□□ 0.26
Nphp4P59240 Rnf17-202ENSMUST00000223627 2077 ntBASIC16.65■□□□□ 0.26
Nphp4P59240 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Gm8155-201ENSMUST00000216363 1612 ntBASIC16.65■□□□□ 0.26
Nphp4P59240 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.65■□□□□ 0.26
Nphp4P59240 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC16.65■□□□□ 0.26
Nphp4P59240 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC16.65■□□□□ 0.26
Nphp4P59240 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Nphp4P59240 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Nphp4P59240 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
Nphp4P59240 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC16.65■□□□□ 0.26
Nphp4P59240 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Nphp4P59240 AC130671.2-201ENSMUST00000227224 1621 ntBASIC16.65■□□□□ 0.26
Nphp4P59240 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
Nphp4P59240 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nphp4P59240 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC16.64■□□□□ 0.25
Nphp4P59240 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC16.64■□□□□ 0.25
Nphp4P59240 CT009713.8-202ENSMUST00000224732 385 ntBASIC16.64■□□□□ 0.25
Nphp4P59240 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Gm10179-201ENSMUST00000086233 688 ntBASIC16.64■□□□□ 0.25
Nphp4P59240 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nphp4P59240 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Nphp4P59240 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Nphp4P59240 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Nphp4P59240 Gm14150-201ENSMUST00000122404 1354 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Gm15610-201ENSMUST00000120584 195 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Gm9034-201ENSMUST00000182071 1005 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Ighv1-60-201ENSMUST00000195816 405 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 AC154290.1-201ENSMUST00000223786 1240 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Gm37348-201ENSMUST00000193104 1789 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC16.63■□□□□ 0.25
Nphp4P59240 Gm44414-201ENSMUST00000203660 2109 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Nphp4P59240 Adra1a-206ENSMUST00000225182 2337 ntBASIC16.63■□□□□ 0.25
Nphp4P59240 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Nphp4P59240 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms