Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm2P58774 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm2P58774 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm2P58774 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tpm2P58774 Gm44913-201ENSMUST00000208060 2990 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm18307-201ENSMUST00000206864 949 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Gm7642-201ENSMUST00000216345 1809 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 AC159195.3-201ENSMUST00000225162 2211 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Tpm2P58774 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
Tpm2P58774 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tpm2P58774 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.28□□□□□ -0.12
Tpm2P58774 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC14.28□□□□□ -0.12
Tpm2P58774 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Tpm2P58774 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tpm2P58774 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.27□□□□□ -0.12
Tpm2P58774 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.27□□□□□ -0.12
Tpm2P58774 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm2P58774 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Gm16202-201ENSMUST00000117532 544 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm2P58774 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.27□□□□□ -0.13
Tpm2P58774 Gm19184-201ENSMUST00000196798 928 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Tpm2P58774 Gm6458-201ENSMUST00000211573 635 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Gm6983-201ENSMUST00000214912 628 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Itm2b-204ENSMUST00000228637 783 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Gm16372-201ENSMUST00000073088 450 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Tpm2P58774 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Tpm2P58774 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC14.27□□□□□ -0.13
Tpm2P58774 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tpm2P58774 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.27□□□□□ -0.13
Tpm2P58774 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.27□□□□□ -0.13
Tpm2P58774 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm2P58774 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm6211-201ENSMUST00000147973 4275 ntBASIC14.26□□□□□ -0.13
Tpm2P58774 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Tpm2P58774 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm13689-201ENSMUST00000119360 685 ntBASIC14.26□□□□□ -0.13
Tpm2P58774 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tpm2P58774 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm16215-201ENSMUST00000161990 637 ntBASIC14.26□□□□□ -0.13
Tpm2P58774 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Tpm2P58774 Gm44397-201ENSMUST00000195950 113 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms