Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.05□□□□□ -0.48
Lbx1P52955 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.05□□□□□ -0.48
Lbx1P52955 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm14807-201ENSMUST00000116640 983 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm11989-201ENSMUST00000117240 672 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm11362-201ENSMUST00000118838 850 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm14234-201ENSMUST00000119539 845 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm17214-201ENSMUST00000164501 541 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC12.05□□□□□ -0.48
Lbx1P52955 Mir6407-201ENSMUST00000184510 101 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm37852-201ENSMUST00000193027 350 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm4157-201ENSMUST00000211647 679 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm6390-201ENSMUST00000215034 589 ntBASIC12.05□□□□□ -0.48
Lbx1P52955 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lbx1P52955 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Lbx1P52955 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Lbx1P52955 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lbx1P52955 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Lbx1P52955 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Lbx1P52955 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Gm12857-201ENSMUST00000117678 592 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.04□□□□□ -0.48
Lbx1P52955 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC12.04□□□□□ -0.48
Lbx1P52955 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm6450-201ENSMUST00000200896 574 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Gm39404-201ENSMUST00000216350 313 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lbx1P52955 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm6903-201ENSMUST00000160509 1366 ntBASIC12.04□□□□□ -0.48
Lbx1P52955 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC12.04□□□□□ -0.48
Lbx1P52955 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Lbx1P52955 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Lbx1P52955 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lbx1P52955 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Lbx1P52955 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms