Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RoraP51448 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RoraP51448 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RoraP51448 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.8□□□□□ -0.52
RoraP51448 Gm14017-201ENSMUST00000121934 386 ntBASIC11.8□□□□□ -0.52
RoraP51448 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.8□□□□□ -0.52
RoraP51448 Gm13570-201ENSMUST00000140763 309 ntBASIC11.8□□□□□ -0.52
RoraP51448 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.8□□□□□ -0.52
RoraP51448 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.8□□□□□ -0.52
RoraP51448 Gm26461-201ENSMUST00000175064 290 ntBASIC11.8□□□□□ -0.52
RoraP51448 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RoraP51448 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.8□□□□□ -0.52
RoraP51448 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Gm5363-201ENSMUST00000211927 938 ntBASIC11.8□□□□□ -0.52
RoraP51448 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.8□□□□□ -0.52
RoraP51448 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
RoraP51448 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.8□□□□□ -0.52
RoraP51448 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
RoraP51448 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
RoraP51448 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RoraP51448 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.79□□□□□ -0.52
RoraP51448 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.79□□□□□ -0.52
RoraP51448 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.79□□□□□ -0.52
RoraP51448 Gm14999-201ENSMUST00000121039 624 ntBASIC11.79□□□□□ -0.52
RoraP51448 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.79□□□□□ -0.52
RoraP51448 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.79□□□□□ -0.52
RoraP51448 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RoraP51448 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RoraP51448 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.79□□□□□ -0.52
RoraP51448 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RoraP51448 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RoraP51448 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.78□□□□□ -0.52
RoraP51448 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RoraP51448 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms