Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Gm8679-201ENSMUST00000210651 1036 ntBASIC14.69□□□□□ -0.06
LtbrP50284 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC14.69□□□□□ -0.06
LtbrP50284 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 AC122197.2-201ENSMUST00000219196 1635 ntBASIC14.69□□□□□ -0.06
LtbrP50284 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
LtbrP50284 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
LtbrP50284 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
LtbrP50284 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Mir680-2-201ENSMUST00000102163 110 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
LtbrP50284 Gm23251-201ENSMUST00000103773 110 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Gm13035-201ENSMUST00000117496 342 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC14.68□□□□□ -0.06
LtbrP50284 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Gm9358-201ENSMUST00000183067 927 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Mir6546-201ENSMUST00000184460 62 ntBASIC14.68□□□□□ -0.06
LtbrP50284 AY036118-201ENSMUST00000200021 923 ntBASIC14.68□□□□□ -0.06
LtbrP50284 Gm45072-201ENSMUST00000208673 929 ntBASIC14.68□□□□□ -0.06
LtbrP50284 AC172027.1-201ENSMUST00000217659 337 ntBASIC14.68□□□□□ -0.06
LtbrP50284 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.68□□□□□ -0.06
LtbrP50284 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.68□□□□□ -0.06
LtbrP50284 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.68□□□□□ -0.06
LtbrP50284 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
LtbrP50284 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Gm25880-201ENSMUST00000104331 132 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.67□□□□□ -0.06
LtbrP50284 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC14.67□□□□□ -0.06
LtbrP50284 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 Gm6649-201ENSMUST00000199743 1165 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 Gm21027-201ENSMUST00000219300 1236 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 AC154176.1-201ENSMUST00000225897 220 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC14.67□□□□□ -0.06
LtbrP50284 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LtbrP50284 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LtbrP50284 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.67□□□□□ -0.06
LtbrP50284 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
LtbrP50284 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LtbrP50284 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms