Protein–RNA interactions for Protein: P47963

Rpl13, 60S ribosomal protein L13, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl13P47963 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gm10434-201ENSMUST00000101158 471 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rpl13P47963 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.6□□□□□ -0.23
Rpl13P47963 Gm27023-201ENSMUST00000182372 285 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpl13P47963 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpl13P47963 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpl13P47963 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rpl13P47963 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.6□□□□□ -0.23
Rpl13P47963 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpl13P47963 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rpl13P47963 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpl13P47963 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpl13P47963 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpl13P47963 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpl13P47963 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpl13P47963 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Rpl13P47963 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Gm5187-201ENSMUST00000117317 991 ntBASIC13.59□□□□□ -0.23
Rpl13P47963 Gm6023-201ENSMUST00000118217 606 ntBASIC13.59□□□□□ -0.23
Rpl13P47963 Gm13342-201ENSMUST00000121055 207 ntBASIC13.59□□□□□ -0.23
Rpl13P47963 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.59□□□□□ -0.23
Rpl13P47963 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Rpl13P47963 Gm10076-201ENSMUST00000073238 384 ntBASIC13.59□□□□□ -0.23
Rpl13P47963 Gm25857-201ENSMUST00000082788 129 ntBASIC13.59□□□□□ -0.23
Rpl13P47963 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpl13P47963 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpl13P47963 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpl13P47963 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpl13P47963 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.58□□□□□ -0.23
Rpl13P47963 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Rpl13P47963 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rpl13P47963 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Rpl13P47963 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpl13P47963 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.58□□□□□ -0.24
Rpl13P47963 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.58□□□□□ -0.24
Rpl13P47963 Gm23931-201ENSMUST00000103842 109 ntBASIC13.58□□□□□ -0.24
Rpl13P47963 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Gm12058-201ENSMUST00000118614 437 ntBASIC13.58□□□□□ -0.24
Rpl13P47963 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Rpl13P47963 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.58□□□□□ -0.24
Rpl13P47963 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.58□□□□□ -0.24
Rpl13P47963 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Rpl13P47963 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpl13P47963 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms