Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.22□□□□□ -0.77
Timp3P39876 Gm12291-201ENSMUST00000121627 311 ntBASIC10.22□□□□□ -0.77
Timp3P39876 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.22□□□□□ -0.77
Timp3P39876 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Gm38241-201ENSMUST00000192641 898 ntBASIC10.22□□□□□ -0.77
Timp3P39876 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Gm24526-201ENSMUST00000082921 158 ntBASIC10.22□□□□□ -0.77
Timp3P39876 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Timp3P39876 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.22□□□□□ -0.77
Timp3P39876 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC10.22□□□□□ -0.77
Timp3P39876 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Timp3P39876 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Timp3P39876 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.21□□□□□ -0.77
Timp3P39876 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Gm13316-201ENSMUST00000140537 691 ntBASIC10.21□□□□□ -0.77
Timp3P39876 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Timp3P39876 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC10.21□□□□□ -0.77
Timp3P39876 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC10.21□□□□□ -0.77
Timp3P39876 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.21□□□□□ -0.77
Timp3P39876 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.21□□□□□ -0.77
Timp3P39876 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Timp3P39876 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.21□□□□□ -0.78
Timp3P39876 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Timp3P39876 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Timp3P39876 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Timp3P39876 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.21□□□□□ -0.78
Timp3P39876 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Timp3P39876 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Timp3P39876 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Timp3P39876 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Timp3P39876 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms