Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm22018-201ENSMUST00000104357 131 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Gm11618-201ENSMUST00000117946 267 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Gm27682-201ENSMUST00000183930 110 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm35960-201ENSMUST00000202712 767 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.37□□□□□ -0.43
LdlrP35951 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
LdlrP35951 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.37□□□□□ -0.43
LdlrP35951 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
LdlrP35951 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Gm15703-201ENSMUST00000120250 880 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Gm1335-201ENSMUST00000121653 386 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Gm4271-201ENSMUST00000174444 973 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Gm42599-201ENSMUST00000201308 469 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.36□□□□□ -0.43
LdlrP35951 Gm18056-201ENSMUST00000207670 568 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Gm18061-201ENSMUST00000208350 562 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Gm18063-201ENSMUST00000208529 568 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Gm18052-201ENSMUST00000208750 559 ntBASIC12.36□□□□□ -0.43
LdlrP35951 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.36□□□□□ -0.43
LdlrP35951 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
LdlrP35951 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
LdlrP35951 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms