Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Rfc1P35601 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Rfc1P35601 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Rfc1P35601 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rfc1P35601 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Gm38292-201ENSMUST00000192646 3045 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rfc1P35601 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Rfc1P35601 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Gm19184-201ENSMUST00000196798 928 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Gm42550-201ENSMUST00000201553 960 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.09□□□□□ -0.31
Rfc1P35601 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Rfc1P35601 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Gm45677-201ENSMUST00000209975 1341 ntBASIC13.09□□□□□ -0.31
Rfc1P35601 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Rfc1P35601 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Rfc1P35601 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Rfc1P35601 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Rfc1P35601 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.08□□□□□ -0.32
Rfc1P35601 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rfc1P35601 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Rfc1P35601 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.08□□□□□ -0.32
Rfc1P35601 Gm26315-201ENSMUST00000083890 321 ntBASIC13.08□□□□□ -0.32
Rfc1P35601 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Rfc1P35601 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
Rfc1P35601 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Rfc1P35601 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms