Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
Mmp3P28862 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Mmp3P28862 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Mmp3P28862 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp3P28862 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.26□□□□□ -0.29
Mmp3P28862 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Mmp3P28862 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Mmp3P28862 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm20426-201ENSMUST00000173657 440 ntBASIC13.26□□□□□ -0.29
Mmp3P28862 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.26□□□□□ -0.29
Mmp3P28862 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.26□□□□□ -0.29
Mmp3P28862 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.26□□□□□ -0.29
Mmp3P28862 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Gm17827-201ENSMUST00000211825 742 ntBASIC13.26□□□□□ -0.29
Mmp3P28862 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC13.26□□□□□ -0.29
Mmp3P28862 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Mmp3P28862 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Mmp3P28862 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Mmp3P28862 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Gm12176-201ENSMUST00000121420 875 ntBASIC13.25□□□□□ -0.29
Mmp3P28862 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Mir3547-201ENSMUST00000175461 88 ntBASIC13.25□□□□□ -0.29
Mmp3P28862 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
Mmp3P28862 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.25□□□□□ -0.29
Mmp3P28862 AC131330.1-201ENSMUST00000227814 1015 ntBASIC13.25□□□□□ -0.29
Mmp3P28862 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Mmp3P28862 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.25□□□□□ -0.29
Mmp3P28862 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Mmp3P28862 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.24□□□□□ -0.29
Mmp3P28862 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Mmp3P28862 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Mmp3P28862 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms