Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Hoxd8P23463 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxd8P23463 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC12.82□□□□□ -0.36
Hoxd8P23463 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC12.82□□□□□ -0.36
Hoxd8P23463 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Hoxd8P23463 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Hoxd8P23463 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxd8P23463 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Defa-ps4-201ENSMUST00000118021 183 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm27530-201ENSMUST00000184096 98 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm28975-201ENSMUST00000186412 686 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm8956-201ENSMUST00000203939 825 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm45359-201ENSMUST00000210635 427 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm45770-201ENSMUST00000212105 616 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Hoxd8P23463 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Hoxd8P23463 Gm43081-201ENSMUST00000199082 1380 ntBASIC12.81□□□□□ -0.36
Hoxd8P23463 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Hoxd8P23463 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm24891-201ENSMUST00000104391 136 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm5051-201ENSMUST00000204085 485 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm45219-201ENSMUST00000205602 465 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC12.8□□□□□ -0.36
Hoxd8P23463 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm1821-202ENSMUST00000227415 750 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Gm5705-201ENSMUST00000066241 711 ntBASIC12.8□□□□□ -0.36
Hoxd8P23463 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Hoxd8P23463 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Hoxd8P23463 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms