Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm44124-201ENSMUST00000204159 472 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm45930-201ENSMUST00000221330 292 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
PdgfrbP05622 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.59□□□□□ -0.39
PdgfrbP05622 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
PdgfrbP05622 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
PdgfrbP05622 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdgfrbP05622 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.58□□□□□ -0.39
PdgfrbP05622 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdgfrbP05622 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
PdgfrbP05622 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
PdgfrbP05622 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
PdgfrbP05622 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.58□□□□□ -0.39
PdgfrbP05622 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.58□□□□□ -0.4
PdgfrbP05622 Gm12742-201ENSMUST00000117326 410 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Gm13875-201ENSMUST00000120162 282 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.58□□□□□ -0.4
PdgfrbP05622 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
PdgfrbP05622 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.58□□□□□ -0.4
PdgfrbP05622 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
PdgfrbP05622 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
PdgfrbP05622 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.58□□□□□ -0.4
PdgfrbP05622 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Gm18054-201ENSMUST00000207539 555 ntBASIC12.57□□□□□ -0.4
PdgfrbP05622 Gm6007-201ENSMUST00000208170 823 ntBASIC12.57□□□□□ -0.4
PdgfrbP05622 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Gm39404-201ENSMUST00000216350 313 ntBASIC12.57□□□□□ -0.4
PdgfrbP05622 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.57□□□□□ -0.4
PdgfrbP05622 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.57□□□□□ -0.4
PdgfrbP05622 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
PdgfrbP05622 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms