Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.32□□□□□ -0.28
Chrna1P04756 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chrna1P04756 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Chrna1P04756 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
Chrna1P04756 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.32□□□□□ -0.28
Chrna1P04756 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Chrna1P04756 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Chrna1P04756 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Chrna1P04756 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna1P04756 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Chrna1P04756 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chrna1P04756 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm12266-201ENSMUST00000120311 962 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm7722-201ENSMUST00000120646 741 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna1P04756 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm28071-201ENSMUST00000190355 478 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm44136-201ENSMUST00000203819 1106 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm43962-201ENSMUST00000203898 190 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
Chrna1P04756 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Nsd1-205ENSMUST00000224693 852 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm5455-201ENSMUST00000058710 715 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chrna1P04756 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chrna1P04756 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Chrna1P04756 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Gm5525-201ENSMUST00000190438 1312 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Gm2420-201ENSMUST00000119864 2149 ntBASIC13.31□□□□□ -0.28
Chrna1P04756 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Chrna1P04756 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.31□□□□□ -0.28
Chrna1P04756 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.3□□□□□ -0.28
Chrna1P04756 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.3□□□□□ -0.28
Chrna1P04756 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.3□□□□□ -0.28
Chrna1P04756 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.3□□□□□ -0.28
Chrna1P04756 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 AC153954.1-201ENSMUST00000216959 255 ntBASIC13.3□□□□□ -0.28
Chrna1P04756 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC13.3□□□□□ -0.28
Chrna1P04756 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.3□□□□□ -0.28
Chrna1P04756 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.3□□□□□ -0.28
Chrna1P04756 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Chrna1P04756 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms