Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm18159-201ENSMUST00000174516 1070 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a1P02463 Gm37028-201ENSMUST00000194276 107 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 AC122408.1-201ENSMUST00000218949 218 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.97□□□□□ -0.01
Col4a1P02463 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Col4a1P02463 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC14.96□□□□□ -0.01
Col4a1P02463 Gm9034-201ENSMUST00000182071 1005 ntBASIC14.96□□□□□ -0.01
Col4a1P02463 Ighv5-11-201ENSMUST00000193354 371 ntBASIC14.96□□□□□ -0.01
Col4a1P02463 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC14.96□□□□□ -0.01
Col4a1P02463 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col4a1P02463 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 Gm42748-201ENSMUST00000199354 2341 ntBASIC14.96□□□□□ -0.02
Col4a1P02463 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Col4a1P02463 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col4a1P02463 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.95□□□□□ -0.02
Col4a1P02463 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm14193-201ENSMUST00000105067 153 ntBASIC14.95□□□□□ -0.02
Col4a1P02463 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm6407-201ENSMUST00000176468 549 ntBASIC14.95□□□□□ -0.02
Col4a1P02463 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm7593-201ENSMUST00000187246 644 ntBASIC14.95□□□□□ -0.02
Col4a1P02463 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.95□□□□□ -0.02
Col4a1P02463 AC174797.2-202ENSMUST00000225729 568 ntBASIC14.95□□□□□ -0.02
Col4a1P02463 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Col4a1P02463 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Col4a1P02463 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Col4a1P02463 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.94□□□□□ -0.02
Col4a1P02463 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm11451-201ENSMUST00000118946 630 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Col4a1P02463 Mir6998-201ENSMUST00000183343 64 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Gm27910-201ENSMUST00000185004 107 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Gm29499-201ENSMUST00000189151 486 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Gm28329-201ENSMUST00000191208 689 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Gm29171-201ENSMUST00000191397 486 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 AC134860.1-201ENSMUST00000224867 660 ntBASIC14.94□□□□□ -0.02
Col4a1P02463 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms