Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Matn4O89029 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Matn4O89029 Gm13315-201ENSMUST00000120376 991 ntBASIC11.71□□□□□ -0.53
Matn4O89029 Gm12091-201ENSMUST00000146791 830 ntBASIC11.71□□□□□ -0.53
Matn4O89029 Gm5866-201ENSMUST00000177881 973 ntBASIC11.71□□□□□ -0.53
Matn4O89029 Gm18304-201ENSMUST00000189162 546 ntBASIC11.71□□□□□ -0.53
Matn4O89029 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.71□□□□□ -0.53
Matn4O89029 Gm29705-201ENSMUST00000212598 474 ntBASIC11.71□□□□□ -0.53
Matn4O89029 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.71□□□□□ -0.53
Matn4O89029 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
Matn4O89029 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Matn4O89029 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Matn4O89029 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Matn4O89029 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Matn4O89029 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Matn4O89029 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.7□□□□□ -0.54
Matn4O89029 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Mir1894-201ENSMUST00000122802 81 ntBASIC11.7□□□□□ -0.54
Matn4O89029 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Matn4O89029 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.7□□□□□ -0.54
Matn4O89029 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Gm8018-201ENSMUST00000173536 789 ntBASIC11.7□□□□□ -0.54
Matn4O89029 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Gm6244-201ENSMUST00000178732 841 ntBASIC11.7□□□□□ -0.54
Matn4O89029 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Gm6180-201ENSMUST00000065243 498 ntBASIC11.7□□□□□ -0.54
Matn4O89029 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Matn4O89029 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Matn4O89029 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.7□□□□□ -0.54
Matn4O89029 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Matn4O89029 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.7□□□□□ -0.54
Matn4O89029 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.69□□□□□ -0.54
Matn4O89029 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Matn4O89029 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.69□□□□□ -0.54
Matn4O89029 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Matn4O89029 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.69□□□□□ -0.54
Matn4O89029 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Gm11814-201ENSMUST00000119515 929 ntBASIC11.69□□□□□ -0.54
Matn4O89029 Gm9083-201ENSMUST00000120423 819 ntBASIC11.69□□□□□ -0.54
Matn4O89029 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Matn4O89029 Gm22331-201ENSMUST00000158066 136 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms